Man pages for olli0601/PANGEA.HIV.sim
PANGEA.HIV.sim

cmd.HPTN071.input.parser.v4Command line generator for 'HPTN071.input.parser.v2'
cmd.HPTN071.simulatorCommand line generator for 'HPTN071.simulator'
cmd.SeqGen.createInputFilesCommand line generator for...
cmd.SeqGen.runCommand line generator for 'prog.PANGEA.SeqGen.run'
cmd.VirusTreeSimulatorCommand line generator for the 'VirusTreeSimulator'
PANGEA.GTR.paramsCreate data.table of GTR parameters
PANGEA.RootSeq.create.samplerCreate starting sequence sampler
PANGEA.TransmissionEdgeEvolutionaryRate.create.samplerCreate sampler of Evolutionary Rates for transmission edges
PANGEA.WithinHostEvolutionaryRate.create.sampler.v1Create sampler of Within Host Evolutionary Rates
sim.regionalSimulate sequences and viral phylogenetic trees under the...
sim.regional.argsInput arguments to simulate sequences and viral phylogenetic...
olli0601/PANGEA.HIV.sim documentation built on Nov. 23, 2017, 4:10 a.m.