cmd.examl.bsstarttree: Produce a shell command to compute the final boostrap tree.

In olli0601/big.phylo: big.phylo

Description

Internal code.

Usage

cmd.examl.bsstarttree(indir, infile, bs.from = 0, bs.to = 99,
  bs.n = bs.to - bs.from + ifelse(bs.from == 0, 1, 0), outdir = indir,
  prog.mpi = "mpiexec", prog.parser = PR.EXAML.PARSER,
  prog.starttree = PR.EXAML.STARTTREE, prog.examl = PR.EXAML.EXAML,
  args.examl = "-m GAMMA -D", prog.supportadder = PR.EXAML.BS,
  resume = 1, verbose = 1)

Value

Character string.

olli0601/big.phylo documentation built on Nov. 9, 2019, 9:25 a.m.