cmd.fasttree.many.bootstraps: Produce a single FastTree shell command on a bootstrap...

Description Usage Value

View source: R/bigphylo.cmd.R

Description

Produce a single FastTree shell command on a bootstrap alignment.

Usage

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cmd.fasttree.many.bootstraps(infile.fasta, bs.dir, bs.n, outfile,
  pr = PR.FASTTREE, pr.args = "-nt -gtr -gamma",
  prog.bscreate = PR.EXAML.BSCREATE, opt.bootstrap.by = "nucleotide",
  pr.supportadder = PR.RAXML, bs.from = NA, bs.to = NA)

Value

Character string


olli0601/big.phylo documentation built on Nov. 9, 2019, 9:25 a.m.