| beast.add.from.template |
Man page
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| beast.add.monophylyStatistic.for.taxonsets |
Man page
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| beast.add.startingtree |
Man page
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| beast.add.taxa |
Man page
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| beast.add.tmrcaStatistic.for.taxonsets |
Man page
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| beast.adjust.gmrfSkyrideLikelihood |
Man page
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| beast.adjust.mcmc |
Man page
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| beast.adjust.prior.rootheight |
Man page
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| beast.choose.seq.by.clusters |
Man page
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| beast.get.startingtree |
Man page
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| beast.pool.clusters |
Man page
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| beast.read.log |
Man page
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| beast.read.ops |
Man page
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| beast.set.SEQ |
Man page
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| beast.set.TAXON_NAME |
Man page
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| beast2.add.alignment |
Man page
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| beast2.add.bdsky.serialpriors |
Man page
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| beast2.add.cluster.taxonsets |
Man page
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| beast2.add.data |
Man page
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| beast2.add.datetrait |
Man page
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| beast2.add.sasky.serialpriors |
Man page
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| beast2.add.satree |
Man page
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| beast2.add.startingtree.newick |
Man page
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| beast2.add.startingtree.random |
Man page
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| beast2.add.tiplogstem |
Man page
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| beast2.add.tree |
Man page
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| beast2.add.treemodel.bdsky |
Man page
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| beast2.add.treemodel.sasky |
Man page
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| beast2.extract.distinct.topologies |
Man page
|
| beast2.get.prior |
Man page
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| beast2.get.specifications |
Man page
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| beast2.get.xml |
Man page
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| beast2.init.xml |
Man page
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| beast2out.combine.clu.trees |
Man page
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| beast2out.extract.cluster.trees |
Man page
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| beast2out.get.log.evolrate |
Man page
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| beast2out.plot.cluster.trees |
Man page
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| beast2out.pool.cluster.trees |
Man page
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| beast2out.read.nexus.and.stats |
Man page
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| beast2out.read.nodeidtree |
Man page
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| beast2out.read.nodestats |
Man page
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| beast2out.read.trees |
Man page
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| beast2out.tip.date.check |
Man page
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| beastxml.from.template |
Man page
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| beastxml.multilocus.codon.gtr |
Man page
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| beastxml.multilocus.hky.fixed.topology |
Man page
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| beastxml.multilocus.hky.fixed.tree |
Man page
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| treeannotator.get.clusterprob |
Man page
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| treeannotator.get.edgewidth |
Man page
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| treeannotator.get.immu.timeline |
Man page
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| treeannotator.get.phy |
Man page
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| treeannotator.get.rates |
Man page
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| treeannotator.get.tmrcas |
Man page
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| treeannotator.get.viro.timeline |
Man page
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| treeannotator.nodelabels.getnodeheightHPD |
Man page
|
| treeannotator.plot |
Man page
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| treeannotator.plot.ctimeline |
Man page
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| treeannotator.plot.hpdbars |
Man page
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| treeannotator.plot.immu.timeline |
Man page
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| treeannotator.plot.node.ctime |
Man page
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| treeannotator.plot.rates |
Man page
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| treeannotator.plot.seronodeheightrange |
Man page
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| treeannotator.plot.tipmarks |
Man page
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| treeannotator.plot.tipstem.timeline |
Man page
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| treeannotator.plot.viro.timeline |
Man page
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| treeannotator.read |
Man page
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| treeannotator.sero.getnodeheight.range |
Man page
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| treeannotator.tiplabel2df |
Man page
|
