acutils-package: acutils: some utilities

In olobiolo/acutils: Aleks Chlebowski's Utility Functions

Description

Various functions I use more or less often. Some are specifically designed to deal with ScanR data.

functions

• ScanR related:

  • clean_column_names removes superfluous information from column names in result files

  • fetch_files gathers all result files in one location

  • freader loads and preprocesses parameter data

• general purpose:

  • baseline modifies one or more variables in a data frame by subtracting the mean value of a reference set

  • cilp_data removes extreme elements of a vector or data frame

  • center_titles adjusts ggplot theme so that plot titles are centered

  • conf calculates confidence interval of the mean

  • construct.names converts RSz construct names into their respective inserts for purposes of labeling figures

  • empty.plate creates a scaffold for a plate annotation file

  • insert_zeros inserts zeros into strings

  • interlace "mixes" several vectors into one

  • get.stack version of get to be used within functions

  • multiplot prints multiple ggplot plots on a single page

  • pmatrix displays a plate layout in matrix form

  • print_plots prints several ggplot plots to a single pdf file

  • rename_reference_observations changes the category labels of reference observations so they can be plotted as e.g. "time = 0h" rather than "nt"

  • rescale scales a numeric vector

  • retry rerun a function in case of error

  • rotate_labels rotates axis text in a ggplot by 90 degrees

  • sem calculates standard error of the mean

  • show_colors displays available shades of a given color

  • sphere calculates volume of a hyperspphere

  • split_input_string utility for shiny apps; splits an input string into substrings

  • zscore calculates z scores

Author(s)

Aleksander Chlebowski

See Also

Useful links:

• http://github.com/olobiolo/acutils

olobiolo/acutils documentation built on Nov. 28, 2021, 9:35 p.m.