trait_summary: Function to calculate summary statistics for fieldbook data...

In omarbenites/traittools: Tools for manipulating traits using Trait Dictionary from Crop Ontology (one line, title case)

Description

This function is capable of divide the information in categorial or quantitative data based on a data dictionary for potato and sweepotato. If it is categorical, returns the count and mode. And if it is quantitative, returns the count, media and standart desviation.

Usage

trait_summary(fieldbook, trait, genotype = NA, factor = NA,
  trait_dict = NULL, trait_type = NULL, na.rm = TRUE)

Arguments

fieldbook	A data frame of the fieldbook
trait	The name or position of the measured variable that will be summarized.
genotype	The column name of the genotype
factor	The column name of the factor
trait_dict	The data frame of the data dictionary for potato and sweetpotato. NULL in case of not having trait dictionary.
trait_type	Type of trait. Use just in case trait_dict=NULL. There are two types: numerical and categorical
na.rm	A boolean that indicates whether to ignore NA

Value

A data frame with the count, mean and standard desviation of the trait

Author(s)

Omar Benites

omarbenites/traittools documentation built on Dec. 24, 2019, 5:33 a.m.