read_sample_sheet: read_sample_sheet

Description Usage Arguments

View source: R/read_idats.R

Description

read_sample_sheet

Usage

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read_sample_sheet(
  directory = ".",
  csv_file = "csv$",
  ignore.case = TRUE,
  recursive = TRUE,
  full.names = TRUE,
  echo = FALSE
)

Arguments

directory

A character. Location of IDAT files, default is the current working directory.

csv_file

A character. Path to the sample sheet (csv files) or name of the sample sheet in directory.

ignore.case

A logical. A logical value. If TRUE, the directory path is prepended to the file names to give a relative file path. If FALSE, the file names (rather than paths) are returned.

recursive

A logical. Should the listing recurse into directories?

full.names

A logical. Should pattern-matching be case-insensitive?

echo

A logical. Should messages be displayed?


omicsr/dmapaq documentation built on Oct. 13, 2021, 1:08 p.m.