assign_taxo_cause_list: assign taxonomy information to cause list
In oslerinhealth/baker: Bayesian Analysis Kit for Etiology Research
Description
Usage
Arguments
Value
View source: R/clean-perch-data.R
Description
NB: need example; change dir_taxo to an actual matrix or data frame.
Usage
1
assign_taxo_cause_list(cause_list, dir_taxo = NULL)
Arguments
cause_list
See cause_list in model_options$likelihood (see
parameter settings in nplcm())
dir_taxo
File path to the .csv file storing two columns of information:
pathogen, and pathogen_type.
Value
A vector of factors of taxonomy information (currently for "B","F","V").
The names of the vector are pathogen names.
oslerinhealth/baker documentation built on May 22, 2021, 12:05 p.m.
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Description Usage Arguments Value
View source: R/clean-perch-data.R
Description
NB: need example; change dir_taxo to an actual matrix or data frame.
Usage
1 | assign_taxo_cause_list(cause_list, dir_taxo = NULL)
|
Arguments
cause_list |
See |
dir_taxo |
File path to the .csv file storing two columns of information:
|
Value
A vector of factors of taxonomy information (currently for "B","F","V"). The names of the vector are pathogen names.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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