Man pages for ovrhuman/HPOExplorer
Analysis and Visualisation of the Human Phenotype Ontology
| adjacency_matrix | Adjacency matrix |
| download_phenotype_to_genes | Download phenotype_to_genes.txt |
| get_disease_description_dataframe | Generate HPO disease desription dataframe |
| get_gene_list | Get gene list |
| get_hpo_termID | Get HPO Id from phenotype name. |
| get_hpo_termID_direct | Get HPO term ID direct |
| get_ont_level | Get HPO term ontology level |
| get_relative_ont_level | Get relative ont level (for terms in a connected component of... |
| get_relative_ont_level_multiple | Get relative ontology level for multiple HPO terms |
| get_term_definition | Get term definition |
| ggnetwork_plot | Generate network plot |
| hpo_get_term_definition | Get HPO term definition |
| hpo_term_definition_list | Get HPO term description for a list of terms |
| load_phenotype_to_genes | Load phenotype_to_genes.txt |
| make_hoverbox | Make Hoverbox |
| make_network_object | Make network object |
| newlines_to_definition | Add new lines to disease description |
| plot_n_phenotypes_per_branch_hpo | Plot n phenotypes per brach - Highlight selected |
