Man pages for padpadpadpad/TeamPhytoplankton
For studies into thermal adaptation
| add_progress_comment | add progress comment |
| boltzmann | Fits the traditional temperature centred Boltzmann function... |
| create_progress_file | Progress file creator |
| Eilers_Inhib | Eilers PI curve inhibtion ratio |
| Eilers_PI | Fitting a photosynthesis-irradiance curve |
| Eilers_PI_mod | Eilers photosynthesis irradiance curve with varying y... |
| FSCtoMicron | Converts FSC.H to micrometres |
| inv.temp | Inverse of temperature |
| nlsLoop | Loops through a non-linear model on many different curves to... |
| PCR_mix | PCR mix template |
| PI_data | Dataset of photosynthesis irradiance curves |
| Platt_PI | Fitting a photosynthesis-irradiance curve |
| Pmax | Calculating the photosynthetic maximum |
| quasi.rsq.nls | R squared statistic for non linear models |
| read_data_Oxylab | Binds desired O2 view files together |
| schoolfield | Performs the modified Sharpe-Schoolfield equation on thermal... |
| schoolfield.high | Performs the modified Sharpe-Schoolfield equation for high... |
| Schoolfield_Topt | Calculates the optimum temperature |
| SH.Tmax | Empirically calculates the maximum temperature of a... |
| SH.Tmin | Empirically calculates the minimum temperature of a... |
| std.error | Calculates the standard error |
| StockSolVol | Calculates the volume of stock solution needed when making up... |
| TeamPhytoplankton | Team Phytoplankton Functions |
| TeamPhytoplankton-package | Team Phytoplankton Functions |
| Thomas.Tmax | Calculates Tmax for the Thomas TRC |
| Thomas.Tmin | Calculates Tmin for the Thomas TRC |
| ThomasTRC | Fits a thermal performance curve to data using the formula... |
| Tmax | Calculates Tmax for the Thomas TRC |
| Tmin | Calculates Tmin for the Thomas TRC |
| Topt | Calculates the optimum temperature |
