IncPeriod-package: Incubation Period with Uncertain Onset of Infection and...

In pakdaewo/IncPeriod: Incubation Period with Uncertain Onset of Infection and Symptoms

Description

This package provides the distribution of incubation period with the uncertain dates of infection and symptom's onset. It allows users to utilize more data for statistical inference in infectious diseases. The association of the incubation period with patient's risk factors can be also examined using the main funciton IncPeriod. The detailed information is available in Pak et al. (2020).

Details

Package:	IncPeriod
Type:	Package
Version:	0.1.0
Date:	2022-01-03
License:	GPL (>= 3)

Author(s)

Daewoo Pak, Jing Ning and Yu Shen

Maintainer: Daewoo Pak <[e-mail]>

References

Pak, D., Langohr, K., Ning, J., Cortes Martinez, J., Gomez Melis, G. and Shen, Y., 2020. Modeling the coronavirus disease 2019 incubation period: impact on quarantine policy. Mathematics, 8(9), p.1631.

See Also

IncPeriod

Examples

library(IncPeriod)
data(covid19)

date.exposure <- covid19[, 1:2]
date.onset <- covid19[, 3]
date.hosp <- covid19[, 4]
X <- covid19[, 5:6]

res <- IncPeriod(date.exposure, date.onset, date.hosp, X)
res

summary(res)
cplot(res, X = c(age = 42, gender = 1))

pakdaewo/IncPeriod documentation built on Feb. 3, 2022, 12:33 a.m.