plot.pfCompositeLF: plot.pfCompositeLF

In paleofire/paleofire: Analysis of Charcoal Records from the Global Charcoal Database

Description

Plot pfCompositeLF object

Usage

## S3 method for class 'pfCompositeLF'
plot(
  x,
  type = "ci",
  add = "NULL",
  conf = c(0.05, 0.95),
  palette = "jet",
  xlim = NULL,
  ylim = NULL,
  main = "Composite",
  text = FALSE,
  what = "locfit",
  ...
)

Arguments

x	A "pfCompositeLF" object.
type	Character, type of plot among "ci", "prctile", "density"
add	Character, add=NULL by default, add="sitenum" could be specified to plot the sites number in eah bin along with the composite curve.
conf	Numeric, confidence levels.
palette	Character, color palette used with type=c("prctile", "density") among "jet" and "BW".
xlim	Numeric, x axis limits.
ylim	Numeric, y axis limits.
main	Character, title of the plot.
text	Logical, text options.
what	Character, indicates which transformed charcoal trend is used for the plot (type="ci"), default "locfit" indicates that the trend is the locfit applied to All binned data, use "mean" or "median" to plot the mean or median of the locfit relplicates given by the bootstrap procedure.
...	...

Author(s)

O. Blarquez

Examples

## Not run: 
ID=pfSiteSel(continent=="North America", l12==1, long>=-160 & long<=-140)

TR=pfTransform(ID, method=c("MinMax","Box-Cox","MinMax","Z-Score"),
               BasePeriod=c(200,2000),QuantType="INFL")

COMP1=pfCompositeLF(TR, tarAge=seq(-50,4000,10), hw=200, nboot=999)

plot(COMP1, type="density")


## End(Not run)

paleofire/paleofire documentation built on Dec. 29, 2021, 11:09 a.m.