API for palmerito0/kboolnet
kboolnet: A Toolkit for the Verification, Validation, and Visualization of rxncon Models
| Global functions | |
|---|---|
| Home | Source code |
| addQuotes | Source code |
| alignMats | Source code |
| attractorDistance | Source code |
| calculateSensitivity | Source code |
| callBNG | Source code |
| callExtractModules | Source code |
| callNFSim | Source code |
| callPython | Source code |
| callReactionMapping | Source code |
| callRxncon2BNG | Source code |
| callRxncon2Boolnet | Source code |
| callRxncon2Reg | Source code |
| cleanFiles | Source code |
| compMatrix | Source code |
| compareNA | Source code |
| comparePaths | Source code |
| driveDownload | Source code |
| escapeRegex | Source code |
| expandLimits | Source code |
| findDifferenceForInitState | Source code |
| fixedNetwork | Source code |
| gatherMIDASlist | Source code |
| getPathAndAttractor | Source code |
| getYesNo | Source code |
| hamming | Source code |
| identicalScores | Source code |
| list.dirs.depth.n | Source code |
| loadConfig | Source code |
| loadPackageConfig | Source code |
| makeStateSpaceFromResults | Source code |
| mapLigToUnboundNodes | Source code |
| mergeResults | Source code |
| no_zero | Source code Source code |
| pathToGraph | Source code |
| plotCompMat | Source code |
| plotMIDAS | Source code |
| plotMIDASComp | Source code |
| plotPath | Source code |
| plotPathOverlap | Source code |
| readMIDASExcel | Source code |
| removeDomains | Source code |
| removeDomainsXGMML | Source code |
| saveMergedResults | Source code |
| sensibleDefaults | Source code |
| setDefaults | Source code |
| setupKboolnet | Source code |
| simulateWithLigands | Source code |
| simulateWithoutLigands | Source code |
| unbindLigand | Source code |
