createHTMLReport: Make cummeRbund report from Cuffdiff result

Description Usage Arguments Value

View source: R/plots.r

Description

Make cummeRbund report from Cuffdiff result

Usage

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createHTMLReport(cuffdiff_path, output_path, save_plots = FALSE,
  save_width = 7, save_height = 5, save_format = "pdf")

Arguments

cuffdiff_path

Path to cuffdiff folder

output_path

Path to HTML output

save_plots

Save plots into seperate files

save_width

With of exported plot (ggplot only)

save_height

Height of exported plot in 'in' (ggplot only)

save_format

Format of exported plot in 'in' (ggplot only)

Value

cummeRbund cuff object


paulklemm/seqc documentation built on Sept. 12, 2019, 8:15 p.m.