count_go_terms: Quantify GO terms based on data frame containing ensembl ids.
In paulklemm/snrgo: GO-Term analysis for Sonar
Description
Usage
Arguments
Value
Description
Requires a data frame in the following format
'go_frame': colnames(c(ensembl_id, go_id))
'go_description': colnames(go_id)
The function iterates over all elements in 'go_frame' and counts how many elements are present for each 'go_id'
Usage
1
count_go_terms(go_frame, go_description)
Arguments
go_frame
Frame with layout 'colnames(c(ensembl_id, go_id))'
go_description
Go description frame containing at least 'colnames(go_id)'
Value
go_description frame with new 'count' column containing the quantity of each unique 'ensembl_id' in 'go_id'
paulklemm/snrgo documentation built on May 4, 2019, 4:22 p.m.
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Description Usage Arguments Value
Description
Requires a data frame in the following format 'go_frame': colnames(c(ensembl_id, go_id)) 'go_description': colnames(go_id) The function iterates over all elements in 'go_frame' and counts how many elements are present for each 'go_id'
Usage
1 | count_go_terms(go_frame, go_description)
|
Arguments
go_frame |
Frame with layout 'colnames(c(ensembl_id, go_id))' |
go_description |
Go description frame containing at least 'colnames(go_id)' |
Value
go_description frame with new 'count' column containing the quantity of each unique 'ensembl_id' in 'go_id'
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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