README.md

swimr

Visualizations and Reports for SWIM

User's Guide

See https://github.com/tlumip/tlumip/wiki/Visualizing-Outputs

Dependent Libraries

This package uses some dependencies that are not on CRAN. Devtools should find most of these, but the following code will ensure you have all of them.

CRAN Dependencies

if("devtools" %in% rownames(installed.packages()) == FALSE) {install.packages("devtools")}
if("tidyverse" %in% rownames(installed.packages()) == FALSE) {install.packages("tidyverse")}
if("RSQLite" %in% rownames(installed.packages()) == FALSE) {install.packages("RSQLite")}
if("plotly" %in% rownames(installed.packages()) == FALSE) {install.packages("plotly")}
if("kfigr" %in% rownames(installed.packages()) == FALSE) {install.packages("kfigr")}
if("zoo" %in% rownames(installed.packages()) == FALSE) {install.packages("zoo")}
if("leaflet" %in% rownames(installed.packages()) == FALSE) {install.packages("leaflet")}
if("digest" %in% rownames(installed.packages()) == FALSE) {install.packages("digest")}
if("DT" %in% rownames(installed.packages()) == FALSE) {install.packages("DT")}
if("sf" %in% rownames(installed.packages()) == FALSE) {install.packages("sf")}

Bioconductor dependency for omxr

if("rhdf5" %in% rownames(installed.packages()) == FALSE) {
  source("http://bioconductor.org/biocLite.R")
  biocLite("rhdf5")
}

Github libraries

if("omxr" %in% rownames(installed.packages()) == FALSE) {
  devtools::install_github("gregmacfarlane/omxr")
}
if("dplyrExtras" %in% rownames(installed.packages()) == FALSE) {
  devtools::install_github("skranz/dplyrExtras")
}
if("outviz" %in% rownames(installed.packages()) == FALSE) {
  devtools::install_github("pbsag/outviz")
}
if("swimr" %in% rownames(installed.packages()) == FALSE) {
  devtools::install_github("tlumip/swimr", dependencies=FALSE)
}

Developer's Guide



pbsag/swimr documentation built on Feb. 28, 2019, 10:01 p.m.