plot_parameter_density: Plot parameter density.

In pdp10/sbpiper: Data Analysis Functions for 'SBpipe' Package

Description

Plot parameter density.

Usage

plot_parameter_density(df, parameter, fileout, title = "", logspace = TRUE,
  scientific_notation = TRUE)

Arguments

df	the data set containing the parameter estimates to plot.
parameter	the name of the parameter to plot the density
fileout	the output file
title	the plot title (default: "")
logspace	true if the parameters should be plotted in logspace (default: TRUE)
scientific_notation	true if the axis labels should be plotted in scientific notation (default: TRUE)

Examples

dir.create(file.path("pe_plots"))
data(insulin_receptor_all_fits)
colnames(insulin_receptor_all_fits)[1] <- "ObjVal"
insulin_receptor_all_fits[,2:4] <- log10(insulin_receptor_all_fits[,2:4])
fileout <- file.path("pe_plots", "dens_k1.pdf")
plot_parameter_density(df=insulin_receptor_all_fits, 
                       parameter="k1", 
                       fileout=fileout) 

pdp10/sbpiper documentation built on May 17, 2019, 11:17 p.m.