cpg2gene: Mapping CpG signals to genes.
In pfruan/DiSNEP: DiSNEP: a Disease-Specific Enhancement for gene Network Enhancement to improve Prioritizing candidate disease genes
cpg2gene R Documentation
Mapping CpG signals to genes.
Description
Mapping association signals on CpG sites to the correponding genes.
Usage
cpg2gene(cpg, method='smallest')
Arguments
cpg
A data frame for the CpG sites' signals with three columns: "gene", "cpg" and "pvalue"
method
Use which method to map the ssociation signals on CpG sites to the correponding genes.
Value
The data frame with one column of gene name and one column of their p values.
References
DiSNEP: a Disease-Specific gene Network Enhancement to improve Prioritizing candidate disease genes (2020), Peifeng Ruan, Shuang Wang.
Examples
#gene_signals=cpg2gene(cpg_gene)
pfruan/DiSNEP documentation built on Oct. 12, 2023, 3:29 p.m.
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| cpg2gene | R Documentation |
Mapping CpG signals to genes.
Description
Mapping association signals on CpG sites to the correponding genes.
Usage
cpg2gene(cpg, method='smallest')
Arguments
cpg |
A data frame for the CpG sites' signals with three columns: "gene", "cpg" and "pvalue" |
method |
Use which method to map the ssociation signals on CpG sites to the correponding genes. |
Value
The data frame with one column of gene name and one column of their p values.
References
DiSNEP: a Disease-Specific gene Network Enhancement to improve Prioritizing candidate disease genes (2020), Peifeng Ruan, Shuang Wang.
Examples
#gene_signals=cpg2gene(cpg_gene)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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