View source: R/gtoxImportThermoDB.R
gtoxImportThermoDB | R Documentation |
This function accesses the ThermoDB webservices and imports data from ThermoDB to the gtox database.
gtoxImportThermoDB(asid, verbose = TRUE, write = FALSE,
store = "STORE", type = "mc",
curlurl = "https://YOUR_THERMODB_SERVER_HOSTNAME/HTTPHCSConnect")
asid |
Integer, the assay study/source ID to import data for |
verbose |
Logical, should the output from the curl be displayed? |
write |
Logical, should the data be written to the database, or just returned? |
store |
Character, the name of the store on ThermoDB to query |
type |
Character, the data type: 'mc' or 'sc' |
curlurl |
URL of the webservice |
Data table with content fetched from Thermo DB.
## Fetches data from ThermoDB to load in GladiaTOX DB prior processing
conf_store <- gtoxConfList()
gtoxConfDefault()
## Not run:
## Fetch data from ThermoDB
dat <- gtoxImportThermoDB(asid=1L)
## End(Not run)
## Reset configuration
options(conf_store)
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