Files in philliplab/hdsResistanceModel
Hybrid Dynamic/Stochastic Model of HIV Resistance Evolution
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/compute_parameters.R
R/dataset_docs.R
R/de_system.R
R/de_system_analysis.R
R/format_data.R
R/get_scenario.R
R/plot_system.R
R/scenario.R
R/scenario_treatment_ui.R
R/scenario_ui.R
R/shiny_app.R
R/toggle_mutation_matrix.R
README.md
TODO
data/ss_tc_AccuTams_1_2_s4.rda
data/ss_tc_Simple_1_0_s4.rda
data/ss_tc_Simple_1_2_s4.rda
inst/tests/test-compute_parameters.R
inst/tests/test-de_system.R
inst/tests/test-de_system_analysis.R
inst/tests/test-get_scenario.R
inst/tests/test-scenario.R
inst/tests/test-toggle_mutation_matrix.R
inst/www/server.R
inst/www/ui.R
man/calc_growth_time.Rd
man/compute_fitnessAdjustment.Rd
man/compute_newStrainLevel.Rd
man/compute_offThreshold.Rd
man/compute_parameters.Rd
man/compute_stable_populations.Rd
man/eventFunc.Rd
man/findSteadyState.Rd
man/format_data.Rd
man/get_all_scenarios.Rd
man/get_scenario.Rd
man/get_scenario_names.Rd
man/kBase_steady_state_relationship.Rd
man/make_scenario_ui.Rd
man/plot_component.Rd
man/plot_system.Rd
man/rootFunc.Rd
man/run_hdsResistanceModel_app.Rd
man/run_system.Rd
man/scenario.Rd
man/ss_tc_AccuTams_1_2_s4.Rd
man/ss_tc_Simple_1_0_s4.Rd
man/ss_tc_Simple_1_2_s4.Rd
man/stateFunc.Rd
man/steady_state_kBase_relationship.Rd
man/toggle_mutation_matrix.Rd
man/treatment_ui_from_scenario.Rd
tests/test-all.R
