coalescent.intervals.multi: Function that computes the coalescent intervals of...
In phoscheit/LambdaSkyline: Demographic Analysis of Multifurcating Phylogenies
View source: R/auxiliary_functions.R
Description
Extension of the coalescent.intervals function in ape. Takes a phylogeny (class phylo) as input and returns a coalescentIntervals object,
which lists the interval lengths, in backwards time, along with the number of lineages during each of those intervals. Contrary to the ape
function, this can deal with multifurcations, as well as serially-sampled (non-ultrametric) trees.
Usage
1
Arguments
x
Phylogeny
phoscheit/LambdaSkyline documentation built on May 3, 2019, 8:36 p.m.
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View source: R/auxiliary_functions.R
Description
Extension of the coalescent.intervals function in ape. Takes a phylogeny (class phylo) as input and returns a coalescentIntervals object, which lists the interval lengths, in backwards time, along with the number of lineages during each of those intervals. Contrary to the ape function, this can deal with multifurcations, as well as serially-sampled (non-ultrametric) trees.
Usage
1 |
Arguments
x |
Phylogeny |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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