Files in phraber/pixelgram
Pixel View with Accompanying Phylogram of Sequence Alignment
.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
NAMESPACE
R/CH505.R
R/create.refseq.lut.R
R/create.timepoint.parser.R
R/excise.refseq.R
R/get.refseq.row.R
R/hiv.ref.R
R/parse.timepoints.R
R/pixelgram.R
R/pixelgram.default.R
R/pixmap.colors.R
R/plot.R
R/pngs2o.R
R/set.refseq.R
R/sysdata.rda
R/zzz.R
README.md
data-raw/CH505.R
data-raw/hiv.ref.R
data-raw/pixmap.colors.R
data/CH505.rda
data/hiv.ref.rda
examples.pdf
inst/CITATION
inst/doc/pixelgram.R
inst/doc/pixelgram.Rmd
inst/doc/pixelgram.html
inst/extdata/CH505-gp160.fasta
inst/extdata/CH505-gp160.tre
inst/extdata/color-lut.csv
inst/extdata/hiv-ref.fasta
inst/extdata/hiv-ref.tre
inst/perl/ladderize.pl
man/CH505.Rd
man/color.edges.Rd
man/create.timepoint.parser.Rd
man/hiv.ref.Rd
man/parse.timepoints.Rd
man/pixelgram.Rd
man/pixmap_colors.Rd
man/plot.pixelgram.Rd
man/set.aln.file.Rd
man/set.tre.file.Rd
pixelgram.Rproj
vignettes/pixelgram.Rmd
