new_de_benchmark: Merge results from differential expression tools
In pimentel/mamabear: Mamabear: Ensures da bears are behaving
Description
Merge results from differential expression tools to benchmark calls. Plots and stuff can be made from this object as well
Usage
1
2
new_de_benchmark(de_list, de_labels, oracle, de_colors = NULL,
join_mode = "intersect")
Arguments
de_list
a list of de results
oracle
a data.frame with the columns target_id, is_de and other optional columns (TBD)
de_colors
a named list of what colors to assign to what tool. The name corresponds to the method. If not named, will assign in alphabetical order. If NULL, colors will be chosen automatically.
de_label
a character vector of the same length as de_list with labels for each method
pimentel/mamabear documentation built on May 25, 2019, 7:13 a.m.
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Description
Merge results from differential expression tools to benchmark calls. Plots and stuff can be made from this object as well
Usage
1 2 | new_de_benchmark(de_list, de_labels, oracle, de_colors = NULL,
join_mode = "intersect")
|
Arguments
de_list |
a list of de results |
oracle |
a data.frame with the columns target_id, is_de and other optional columns (TBD) |
de_colors |
a named list of what colors to assign to what tool. The name corresponds to the method. If not named, will assign in alphabetical order. If |
de_label |
a character vector of the same length as de_list with labels for each method |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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