Man pages for plger/pipeComp
pipeComp pipeline benchmarking framework

addPipelineStepaddPipelineStep
aggregatePipelineResultsaggregatePipelineResults
buildCombMatrixbuildCombMatrix
checkPipelinePackagescheckPipelinePackages
clustMetricsCorrCorrelations across clustering evaluation metrics
colCenterScalecolCenterScale
ctrlgenesLists of control genes
dea_evalPlot_curvedea_evalPlot_curve
dea_pipelinedea_pipeline
defaultStepAggregationdefaultStepAggregation
evalHeatmapevalHeatmap
evaluateClusteringevaluateClustering
evaluateDEAevaluateDEA
evaluateDimRedevaluateDimRed
evaluateNormevaluateNorm
exampleDEAresultsExample results from the DEA pipeline
exampleResultsExample pipeline results
farthestPointfarthestPoint
getDimensionalitygetDimensionality
getQualitativePalettegetQualitativePalette
match_evaluate_multiplematch_evaluate_multiple
mergePipelineResultsmergePipelineResults
mockPipelinemockPipeline
parsePipNamesparsePipNames
pipeComp-packagepipeComp - a framework for pipeline benchmarking
PipelineDefinitionPipelineDefinition
PipelineDefinition-methodsMethods for 'PipelineDefinition' class
plotElapsedplotElapsed
readPipelineResultsreadPipelineResults
runPipelinerunPipeline
scrna_describeDatasetsscrna_describeDatasets
scrna_evalPlot_filteringscrna_evalPlot_filtering
scrna_evalPlot_overallscrna_evalPlot_overall
scrna_evalPlot_silhscrna_evalPlot_silh
scrna_pipelinescrna_pipeline
stableGLists of stable genes
plger/pipeComp documentation built on Nov. 2, 2021, 8:40 p.m.