clean_LANL: Clean the LANL database.
In pmgrollemund/phyloHIV:
View source: R/other_functions.R
Description
Remove sequences which are duplicates (with regards to accesion
number or name) and remove sequences for which the name does not contain
the required information.
Usage
1
clean_LANL(name_file, info_number, verbose = TRUE)
Arguments
name_file
a character vector, the LANL file names by subtype.
info_number
an integer, the number of information in the sequence names.
verbose
Write stuff.
pmgrollemund/phyloHIV documentation built on Nov. 5, 2019, 12:56 a.m.
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View source: R/other_functions.R
Description
Remove sequences which are duplicates (with regards to accesion number or name) and remove sequences for which the name does not contain the required information.
Usage
1 | clean_LANL(name_file, info_number, verbose = TRUE)
|
Arguments
name_file |
a character vector, the LANL file names by subtype. |
info_number |
an integer, the number of information in the sequence names. |
verbose |
Write stuff. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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