tips_relabelling: tips_relabelling

In pmgrollemund/phyloHIV:

Description

Script for:

Usage

tips_relabelling(tree_names, person, sequences_meta, Country_db,
  vars_for_label, local_group = "WA", focus_group = "KC",
  focus_subgroup = NULL, index_subgroup = NULL, name_subgroup = NULL,
  negative = "non", local_indicator = "PR/RT",
  focus_indicator = TRUE, separator = "___", blacklist_paths = NULL,
  blacklist_names = NULL, Unknown = "Unknown", local_tip_split = "-",
  external_tip_split = "[.]", local_index_location = 8,
  external_index_location = 2, bs.n = 50, bs.id = NA,
  verbose = TRUE)

Arguments

tree_names	XXXX
person	XXXX
sequences_meta	XXXX
Country_db	XXXX
vars_for_label	XXXX
local_group	XXX
focus_group	XXXX
focus_subgroup	XXX
index_subgroup	XXXX
name_subgroup	XXX
negative	XXXX
local_indicator	XXX
focus_indicator	XXXX
separator	XXX
blacklist_paths	XXXX
blacklist_names	XXX
Unknown	XXXX
local_tip_split	XXX
external_tip_split	XXXX
local_index_location	XXX
external_index_location	XXXX
bs.n	XXXX
bs.id	XXXX
verbose	XXXX

Value

dqsfds

pmgrollemund/phyloHIV documentation built on Nov. 5, 2019, 12:56 a.m.