load.bs.genome: Loads (or downloads) the required BSGenome package
In pmoulos/metaseqR-local: An R package for the analysis and result reporting of RNA-Seq data by combining multiple statistical algorithms.
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Retrieves the required BSgenome package when the
annotation source is "ucsc" or
"refseq". These packages are required in order
to estimate the GC-content of the retrieved genes from
UCSC or RefSeq.
Usage
1
load.bs.genome(org)
Arguments
org
one of metaseqr supported
organisms.
Value
A proper BSgenome package name.
Author(s)
Panagiotis Moulos
Examples
1
bs.obj <- load.bs.genome("mm9")
pmoulos/metaseqR-local documentation built on May 9, 2019, 1:13 a.m.
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Description Usage Arguments Value Author(s) Examples
Description
Retrieves the required BSgenome package when the
annotation source is "ucsc" or
"refseq". These packages are required in order
to estimate the GC-content of the retrieved genes from
UCSC or RefSeq.
Usage
1 | load.bs.genome(org)
|
Arguments
org |
one of |
Value
A proper BSgenome package name.
Author(s)
Panagiotis Moulos
Examples
1 | bs.obj <- load.bs.genome("mm9")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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