meta.worker: Permutation tests helper

In pmoulos/metaseqR-local: An R package for the analysis and result reporting of RNA-Seq data by combining multiple statistical algorithms.

Description

This function performs the statistical test for each permutation. Internal use only.

Usage

    meta.worker(x,co,sl,cnt,s,r,sa,ll,
        el,w)

Arguments

x	a virtual list with the random seed and the permutation index.
co	the counts matrix.
sl	the sample list.
cnt	the contrast name.
s	the statistical algorithms.
sa	the parameters for each statistical algorithm.
ll	a list with library sizes.
r	same as the replace argument in the sample function.
el	min, max or weight.
w	a numeric vector of weights for each statistical algorithm

Value

A matrix of p-values.

Author(s)

Panagiotis Moulos

Examples

# Not yet available

pmoulos/metaseqR-local documentation built on May 9, 2019, 1:13 a.m.