mlfo: MLE dispersion estimate

Description Usage Arguments Value Author(s) Examples

Description

MLE function used to estimate negative binomial dispersions from real RNA-Seq data, as in (Soneson and Delorenzi, BMC Bioinformatics, 2013) and (Robles et al., BMC Genomics, 2012). Internal use.

Usage

1
    mlfo(phi, y)

Arguments

phi

the parameter to be optimized.

y

count samples used to perform the optimization.

Value

The objective function value.

Author(s)

Panagiotis Moulos

Examples

1
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pmoulos/metaseqR-local documentation built on May 9, 2019, 1:13 a.m.