get.ucsc.tbl.tpl: Create SQLite UCSC table template defintions

Description Usage Arguments Value Author(s) Examples

View source: R/metaseqr.query.R

Description

Returns an SQLIte table template defintion, according to UCSC Genome Browser database table schemas. This functionality is used when the package RMySQL is not available for some reason, e.g. Windows machines. Internal use only.

Usage

1
    get.ucsc.tbl.tpl(tab, what="queries")

Arguments

tab

name of UCSC database table.

what

"queries" for SQLite table definitions or "fields" for table column names.

Value

An SQLite table definition.

Author(s)

Panagiotis Moulos

Examples

1
db.table.tmpl <- get.ucsc.tbl.tpl("knownCanonical")

pmoulos/metaseqR documentation built on Dec. 21, 2020, 6:19 a.m.