load.bs.genome: Loads (or downloads) the required BSGenome package

Description Usage Arguments Value Author(s) Examples

Description

Retrieves the required BSgenome package when the annotation source is "ucsc" or "refseq". These packages are required in order to estimate the GC-content of the retrieved genes from UCSC or RefSeq.

Usage

1

Arguments

org

one of metaseqr supported organisms.

Value

A proper BSgenome package name.

Author(s)

Panagiotis Moulos

Examples

1
bs.obj <- load.bs.genome("mm9")

pmoulos/metaseqR documentation built on May 9, 2019, 12:58 a.m.