getsetDbPath: Get and set sitadela default database path

In pmoulos/sitadela: An R package for the easy provision of simple but complete tab-delimited genomic annotation from a variety of sources and organisms

Get and set sitadela default database path

Description

The setDbPath and getDbPath functions are used to set and get the path to a sitadela annotation database. If not explicitly provided, it defaults to file.path(system.file(package="sitadela"),"annotation.sqlite"). Essentially, the setter function adds an option to the R environment pointing to the desired path.

Usage

    setDbPath(db = NULL)
    getDbPath()

Arguments

db	path to a valid SQLite database file.

Value

This function does not have a return value.

Author(s)

Panagiotis Moulos

Examples

myPath <- "/home/me/test.sqlite"
setDbPath(myPath)
getDbPath()

pmoulos/sitadela documentation built on May 19, 2024, 3:52 a.m.