glycan_class_enrichment: glycan class enrichment analysis
In pmtran5884/Glycancc: Community Clustering of Anti-Carbohydrate Antibody data
View source: R/analyze_graph_clusters.R
glycan_class_enrichment R Documentation
glycan class enrichment analysis
Description
This function calculates the significance of enrichment of glycans for
each glycan class in each glycan cluster using fisher's exact test
Usage
glycan_class_enrichment(co_cluster = co_cluster, glygroups = glycan_classes)
Arguments
co_cluster
data frame of iggdata
glygroups
p-value cutoff for edge removal from graph. Default = 0.05
Value
list including a full table and partial table of significantly enriched classes
pmtran5884/Glycancc documentation built on Oct. 5, 2022, 10:14 a.m.
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View source: R/analyze_graph_clusters.R
| glycan_class_enrichment | R Documentation |
glycan class enrichment analysis
Description
This function calculates the significance of enrichment of glycans for each glycan class in each glycan cluster using fisher's exact test
Usage
glycan_class_enrichment(co_cluster = co_cluster, glygroups = glycan_classes)
Arguments
co_cluster |
data frame of iggdata |
glygroups |
p-value cutoff for edge removal from graph. Default = 0.05 |
Value
list including a full table and partial table of significantly enriched classes
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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