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Boreal Caribou Survival, Recruitment and Population Growth

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.github/workflows/pkgdown.yaml

.github/workflows/test-coverage.yaml

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CODE_OF_CONDUCT.md

DESCRIPTION

LICENSE

NAMESPACE

NEWS.md R/augment.R R/bboutools-package.R R/chk.R R/coef.R R/data-recruitment.R R/data-survival.R R/derived.R R/devtools-helpers.R R/fit-recruitment-ml.R R/fit-recruitment.R R/fit-survival-ml.R R/fit-survival.R R/getters.R R/glance.R R/licensing.R R/logLik.R R/model-code.R R/model-recruitment.R R/model-survival.R R/namespace.R R/nimble.R R/nobs.R R/params.R R/plot-month-survival.R R/plot-month.R R/plot-year-calf-cow-ratio.R R/plot-year-growth.R R/plot-year-recruitment.R R/plot-year-survival.R R/plot-year-trend-calf-cow-ratio.R R/plot-year-trend-recruitment.R R/plot-year-trend-survival.R R/plot-year-trend.R R/plot-year.R R/plot.R R/predict-growth.R R/predict-trend.R R/predict.R R/priors.R R/remove.R R/samples.R R/summary.R

R/sysdata.rda

R/terms.R R/test-helpers.R R/tidy.R R/universals.R R/utils.R R/vld.R README.Rmd README.md

_pkgdown.yml

bboutools.Rproj

codecov.yml

data-raw/DATASET.R

demo/00Index

man/figures/README-unnamed-chunk-5-1.png

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man/glance.bboufit.Rd man/glance.bboufit_ml.Rd man/licensing_md.Rd man/model_code.Rd man/model_recruitment.Rd man/model_survival.Rd man/nchains.bboufit.Rd man/niters.bboufit.Rd man/npars.bboufit.Rd man/npars.bboufit_ml.Rd man/nterms.bboufit.Rd man/nterms.bboufit_ml.Rd man/params.Rd man/pars.bboufit.Rd man/pars.bboufit_ml.Rd man/predict.bboufit_recruitment.Rd man/predict.bboufit_survival.Rd man/reexports.Rd man/rhat.bboufit.Rd man/samples.Rd man/tidy.bboufit.Rd man/tidy.bboufit_ml.Rd scripts/build.R tests/testthat.R tests/testthat/_snaps/generics.md

tests/testthat/_snaps/generics/augment.csv

tests/testthat/_snaps/generics/augment_ml.csv

tests/testthat/_snaps/generics/conf_level.csv

tests/testthat/_snaps/generics/conf_level_ml.csv

tests/testthat/_snaps/generics/estimate.csv

tests/testthat/_snaps/generics/glance.csv

tests/testthat/_snaps/generics/glance_ml.csv

tests/testthat/_snaps/generics/sig_fig.csv

tests/testthat/_snaps/generics/sig_fig_ml.csv

tests/testthat/_snaps/generics/tidy.csv

tests/testthat/_snaps/generics/tidy_ml.csv

tests/testthat/_snaps/model-recruitment/caribou_year_code.csv

tests/testthat/_snaps/model-recruitment/caribou_year_const.csv

tests/testthat/_snaps/model-recruitment/est_female_prop_code.csv

tests/testthat/_snaps/model-recruitment/est_female_prop_const.csv

tests/testthat/_snaps/model-recruitment/female_prop_code.csv

tests/testthat/_snaps/model-recruitment/female_prop_const.csv

tests/testthat/_snaps/model-recruitment/fixed_code.csv

tests/testthat/_snaps/model-recruitment/fixed_const.csv

tests/testthat/_snaps/model-recruitment/priors_code.csv

tests/testthat/_snaps/model-recruitment/priors_const.csv

tests/testthat/_snaps/model-recruitment/sex_ratio_code.csv

tests/testthat/_snaps/model-recruitment/sex_ratio_const.csv

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tests/testthat/_snaps/model-survival/trend_code.csv

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tests/testthat/_snaps/model-survival/year_start_const.csv

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tests/testthat/_snaps/plot-year-growth/plot_year_growth.png

tests/testthat/_snaps/plot-year-growth/plot_year_growth_ml.png

tests/testthat/_snaps/plot-year-growth/plot_year_population_change.png

tests/testthat/_snaps/plot-year-growth/plot_year_population_change_ml.png

tests/testthat/_snaps/plot-year-recruitment/dataframe.png

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tests/testthat/_snaps/plot-year-trend-calf-cow-ratio/plot_year_trend_calf_cow_ratio_df.png

tests/testthat/_snaps/plot-year-trend-recruitment/plot_year_trend_0.png

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tests/testthat/_snaps/plot-year-trend-survival/plot_year_trend_survival.png

tests/testthat/_snaps/plot-year-trend-survival/plot_year_trend_survival_df.png

tests/testthat/_snaps/plot-year-trend-survival/plot_year_trend_survival_ml.png

tests/testthat/_snaps/plot-year-trend-survival/plot_year_trend_survival_ml_df.png

tests/testthat/_snaps/plot-year/plot_year_predict_0.png

tests/testthat/_snaps/plot-year/plot_year_predict_1.png

tests/testthat/_snaps/plot-year/plot_year_predict_survival.png

tests/testthat/_snaps/plot-year/plot_year_predict_survival_ml.png

tests/testthat/_snaps/plot-year/plot_year_recruitment.png

tests/testthat/_snaps/plot-year/plot_year_recruitment_ml.png

tests/testthat/_snaps/plot-year/plot_year_survival.png

tests/testthat/_snaps/plot-year/plot_year_survival_ml.png

tests/testthat/_snaps/predict-calf-cow/bb_predict_calf_cow.csv

tests/testthat/_snaps/predict-calf-cow/bb_predict_calf_cow_ml.csv

tests/testthat/_snaps/predict-calf-cow/bb_predict_calf_cow_ml_fixed.csv

tests/testthat/_snaps/predict-calf-cow/bb_predict_calf_cow_ml_trend.csv

tests/testthat/_snaps/predict-calf-cow/bb_predict_recruitment_trend.csv

tests/testthat/_snaps/predict-growth/bb_predict_growth.csv

tests/testthat/_snaps/predict-growth/bb_predict_growth_conf_level.csv

tests/testthat/_snaps/predict-growth/bb_predict_growth_estimates.csv

tests/testthat/_snaps/predict-growth/bb_predict_growth_estimates_zero.csv

tests/testthat/_snaps/predict-growth/bb_predict_growth_ml.csv

tests/testthat/_snaps/predict-growth/bb_predict_growth_one.csv

tests/testthat/_snaps/predict-growth/bb_predict_growth_sex_ratio.csv

tests/testthat/_snaps/predict-growth/bb_predict_growth_sig_fig.csv

tests/testthat/_snaps/predict-growth/bb_predict_growth_trend.csv

tests/testthat/_snaps/predict-population-change/bb_predict_popchange.csv

tests/testthat/_snaps/predict-population-change/bb_predict_popchange_conf_level.csv

tests/testthat/_snaps/predict-population-change/bb_predict_popchange_ml.csv

tests/testthat/_snaps/predict-population-change/bb_predict_popchange_sex_ratio.csv

tests/testthat/_snaps/predict-population-change/bb_predict_popchange_sig_fig.csv

tests/testthat/_snaps/predict-population-change/bb_predict_popchange_trend.csv

tests/testthat/_snaps/predict-population-change/bb_predict_pophange_estimates.csv

tests/testthat/_snaps/predict-recruitment/bb_predict_recruitment.csv

tests/testthat/_snaps/predict-recruitment/bb_predict_recruitment_1.csv

tests/testthat/_snaps/predict-recruitment/bb_predict_recruitment_conf_level.csv

tests/testthat/_snaps/predict-recruitment/bb_predict_recruitment_estimates.csv

tests/testthat/_snaps/predict-recruitment/bb_predict_recruitment_ml.csv

tests/testthat/_snaps/predict-recruitment/bb_predict_recruitment_ml_fixed.csv

tests/testthat/_snaps/predict-recruitment/bb_predict_recruitment_ml_trend.csv

tests/testthat/_snaps/predict-recruitment/bb_predict_recruitment_trend.csv

tests/testthat/_snaps/predict-recruitment/bb_predict_recruitment_trend_1.csv

tests/testthat/_snaps/predict-recruitment/predict_recruitment.csv

tests/testthat/_snaps/predict-recruitment/predict_recruitment_ml.csv

tests/testthat/_snaps/predict-recruitment/predict_recruitment_sig_fig.csv

tests/testthat/_snaps/predict-survival/bb_predict_survival.csv

tests/testthat/_snaps/predict-survival/bb_predict_survival_1.csv

tests/testthat/_snaps/predict-survival/bb_predict_survival_conf_level.csv

tests/testthat/_snaps/predict-survival/bb_predict_survival_estimates.csv

tests/testthat/_snaps/predict-survival/bb_predict_survival_ml.csv

tests/testthat/_snaps/predict-survival/bb_predict_survival_ml_fixed.csv

tests/testthat/_snaps/predict-survival/bb_predict_survival_ml_trend.csv

tests/testthat/_snaps/predict-survival/bb_predict_survival_month.csv

tests/testthat/_snaps/predict-survival/bb_predict_survival_month_year.csv

tests/testthat/_snaps/predict-survival/bb_predict_survival_trend.csv

tests/testthat/_snaps/predict-survival/bb_predict_survival_trend_1.csv

tests/testthat/_snaps/predict-survival/bb_predict_survival_trend_month.csv

tests/testthat/_snaps/predict-survival/bb_predict_survival_trend_month_year.csv

tests/testthat/_snaps/predict-survival/predict_survival.csv

tests/testthat/_snaps/predict-survival/predict_survival_ml.csv

tests/testthat/_snaps/predict-survival/predict_survival_sig_fig.csv

tests/testthat/_snaps/predict-trend/bb_predict_calf_cow_ratio_trend_trend.csv

tests/testthat/_snaps/predict-trend/bb_predict_calf_cow_ratio_trend_trend_ml.csv

tests/testthat/_snaps/predict-trend/bb_predict_recruitment_trend_trend.csv

tests/testthat/_snaps/predict-trend/bb_predict_recruitment_trend_trend_ml.csv

tests/testthat/_snaps/predict-trend/bb_predict_survival_trend_trend.csv

tests/testthat/_snaps/predict-trend/bb_predict_survival_trend_trend_ml.csv

tests/testthat/_snaps/zzzfit-recruitment-ml/default.csv

tests/testthat/_snaps/zzzfit-recruitment/default.csv

tests/testthat/_snaps/zzzfit-survival-ml/default.csv

tests/testthat/_snaps/zzzfit-survival/default.csv

tests/testthat/_snaps/zzzfit-survival/niters.csv

vignettes/.gitignore

vignettes/articles/bibliography.bib

vignettes/articles/methods.Rmd vignettes/articles/priors.Rmd vignettes/bboutools.Rmd

vignettes/bibliography.bib

poissonconsulting/bboutools documentation built on July 16, 2025, 11:14 p.m.

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poissonconsulting/bboutools
Boreal Caribou Survival, Recruitment and Population Growth

Files in poissonconsulting/bboutools
Boreal Caribou Survival, Recruitment and Population Growth

R Package Documentation

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poissonconsulting/bboutools Boreal Caribou Survival, Recruitment and Population Growth

Files in poissonconsulting/bboutools Boreal Caribou Survival, Recruitment and Population Growth

R Package Documentation

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We want your feedback!

poissonconsulting/bboutools
Boreal Caribou Survival, Recruitment and Population Growth

Files in poissonconsulting/bboutools
Boreal Caribou Survival, Recruitment and Population Growth