plot_density_: Plot density estimates
In powellgenomicslab/Nebulosa_Rv3: Single-Cell Data Visualisation Using Kernel Gene-Weighted Density Estimation
Description
Usage
Arguments
Value
Author(s)
Description
Plot density estimates
Usage
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plot_density_(
z,
feature,
cell_embeddings,
dim_names,
shape,
size,
legend_title,
pal = c("viridis", "magma", "cividis", "inferno", "plasma")
)
Arguments
z
Vector with density values for each cells
feature
Name of the feature being plotted
cell_embeddings
Matrix with cell embeddings
dim_names
Names of the dimensions from the cell embeddings
shape
Geom shape
size
Geom size
legend_title
String used as legend title
pal
String specifying the viridis color palette to use
Value
A ggplot object
Author(s)
Jose Alquicira-Hernandez
powellgenomicslab/Nebulosa_Rv3 documentation built on Sept. 18, 2020, 12:05 a.m.
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Description Usage Arguments Value Author(s)
Description
Plot density estimates
Usage
1 2 3 4 5 6 7 8 9 10 | plot_density_(
z,
feature,
cell_embeddings,
dim_names,
shape,
size,
legend_title,
pal = c("viridis", "magma", "cividis", "inferno", "plasma")
)
|
Arguments
z |
Vector with density values for each cells |
feature |
Name of the feature being plotted |
cell_embeddings |
Matrix with cell embeddings |
dim_names |
Names of the dimensions from the cell embeddings |
shape |
Geom shape |
size |
Geom size |
legend_title |
String used as legend title |
pal |
String specifying the viridis color palette to use |
Value
A ggplot object
Author(s)
Jose Alquicira-Hernandez
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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