plotFitOnePatch.ggplot2: Plot the results of a 'DICE' Run - Single Region

In predsci/DICE: DICE: Dynamics of Interacting Community Epidemics

Description

Plot the results of DICE run for a single region/patch. We show the incidence along with our fits and if appropriate predictions. We show the best result and randomly selected results from the MCMC chain. This is the ggplot2 version.

Usage

plotFitOnePatch.ggplot2(model_rtn = NULL, model_profile = NULL,
  mydata = NULL, ireal = 1, run.list = NULL, idevice = 1)

Arguments

model_rtn	A 1D numeric array with the best direct prediction to the region
model_profile	A 2D numeric array with randomly chosen predicted profiles obtained by fitting the data
mydata	A dataframe with all the data available for this DICE run
ireal	Integer - the MCMC chain number
run.list	A list with various run parameters
idevice	Integer - the index of the device in the device array. Default is 1 - make only one format of plot results

Value

Returns err = 0 if successful

Examples

plotFitOnePatch{model_rtn = model_rtn, model_profile = model_profile,
mydata = mydata, ireal = ireal, idevice = device}

predsci/DICE documentation built on Aug. 9, 2019, 9:41 a.m.