initializePopulation: Initialize a population of 'PrixFixeNetwork's

In princeew/PFFindR: Identify, evaluate, and visualize enriched Prix Fixe subnetworks

Description

Given a PFData object, generate a random population of PrixFixeNetwork objects of size population_size.

Usage

initializePopulation(
  pf_data,
  population_size,
  members = c("true_members", "null_members")
)

Arguments

pf_data	a PFData object generated by PFDataLoader
population_size	The number of networks to generate for the population.
members	a character string of either true_members or null_members.

Value

A list of size population_size containing PrixFixeNetwork objects.

Examples

## Not run: 
#' # load example PFData (FA genes)
data(PF_FanconiAnemia)
# generate population of subnetworks
population <- initializePopulation(PF_FanconiAnemia, population_size=100, "true_members")

## End(Not run)

princeew/PFFindR documentation built on Dec. 31, 2020, 2:06 a.m.