biplot_data.check_model_GxE: Compute ecovalence and format PCA results for biplot

In priviere/PPBstats: An R package to perform analysis found within PPB programmes

Description

biplot_data.check_model_GxE computes ecovalence and format PCA results from check_model.fit_model_GxE

Usage

## S3 method for class 'check_model_GxE'
biplot_data(x)

Arguments

x	Output from check_model.fit_model_GxE

Details

S3 method. The ecovalence is the interaction matrix squared.

Value

The function returns a list with:

• info : a list with variable and gxe_analysis

• data_ecovalence : the ecovalence matrix

• data_interaction : the interaction matrix

• pca : the pca object

Author(s)

Pierre Riviere

See Also

• biplot_data

• check_model.fit_model_GxE

• plot.biplot_GxE

priviere/PPBstats documentation built on May 6, 2021, 1:20 a.m.