pgxCount: Count samples in one collation of a given filter

In progenetix/pgxRpi: R wrapper for Progenetix

Count samples in one collation of a given filter

Description

This function returns the number of samples for every filter in Progenetix database.

Usage

pgxCount(
  filters = NULL,
  domain = "http://progenetix.org",
  dataset = "progenetix"
)

Arguments

filters	A single or a comma-concatenated list of identifiers such as c("NCIT:C7376","icdom-98353")
domain	A string specifying the domain of database. Default is "http://progenetix.org".
dataset	A string specifying the dataset to query. Default is "progenetix". Other available options are "cancercelllines".

Value

Count of samples in the given filter

Examples

pgxCount(filters = "NCIT:C3512")

progenetix/pgxRpi documentation built on May 7, 2024, 2:57 p.m.