| clumpingResult | clumpingResult class |
| clump_snps | Clumping procedure for SLOPE |
| create_lambda | Lambda sequences for SLOPE |
| geneSLOPE | Genome-Wide Association Study with SLOPE |
| gui_geneSLOPE | GUI for GWAS with SLOPE |
| identify_clump | identify_clump |
| identify_clump.clumpingResult | Identify clump number in clumpingResult class plot |
| identify_clump.selectionResult | Identify clump number in selectionResult class plot |
| phenotypeData | phenotypeData class |
| plot.clumpingResult | Plot clumpingResult class object |
| plot.selectionResult | Plot selectionResult class object |
| print.clumpingResult | Print clumpingResult class object |
| print.phenotypeData | Print phenotypeData class object |
| print.screeningResult | Print function for class screeningResult class |
| print.selectionResult | Print selectionResult class object |
| read_phenotype | Read phenotype from .fam file |
| screeningResult | screeningResult class |
| screen_snps | Reading and screening SNPs from .raw file and |
| selectionResult | selectionResult class |
| select_snps | GWAS with SLOPE |
| summary.clumpingResult | Summary clumpingResult class object |
| summary.phenotypeData | Summary phenotypeData class object |
| summary.screeningResult | Summary function for class screeningResult |
| summary.selectionResult | Summary selectionResult class object |
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