A result of procedure for snp clumping produced by screen_snps
Always a named list of eight elements
X
numeric matrix, consists of snps that passed screening
y
numeric vector, phenotype
X_info
data.frame, SNP info from .map file
pVals
numeric vector, p-values from marginal tests for each snp
numberOfSnps
numeric, total number of SNPs in .raw file
selectedSnpsNumbers
numeric vector, which rows of X_info
data.frame are related to snps that passed screening
pValMax
numeric, p-value used in screening procedure
phenotypeInfo
data.frame, additional information about observations
provied in phenotypeData
object
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.