Files in pvrqualitasag/qgert
Qualitas Genetic Evaluation Routine Tools

.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
NEWS.md R/compare_plot_report_birth.R R/compare_plot_report_carcass_smk.R R/compare_plot_report_carcass_smn.R R/compare_plot_report_carcass_smt.R R/compare_plot_report_cas.R R/compare_plot_report_cnvrh.R R/compare_plot_report_constant.R R/compare_plot_report_fbk.R R/compare_plot_report_gal.R R/compare_plot_report_generic.R R/compare_plot_report_gs_dereg.R R/compare_plot_report_itb.R R/compare_plot_report_lbe.R R/compare_plot_report_lbe_rh.R R/compare_plot_report_mar.R R/compare_plot_report_nd.R R/compare_plot_report_prod.R R/compare_plot_report_tem_bv.R R/compare_plot_report_vrdggozw.R R/compare_plot_report_vrdggozw_prov.R R/compare_plot_report_weaning.R R/get_sort_rt_list.R R/logger.R R/qgert.R R/spin_sh.R R/time_utils.R R/toplist_bull_bvch.R README.Rmd README.md
docs/404.html
docs/articles/alternative_compare_plot.html
docs/articles/alternative_compare_plot_files/header-attrs-2.7/header-attrs.js
docs/articles/comparison_plot_report.html
docs/articles/comparison_plot_report_files/figure-html/unnamed-chunk-8-1.png
docs/articles/comparison_plot_report_files/header-attrs-2.7/header-attrs.js
docs/articles/comparison_plots.html
docs/articles/comparison_plots_files/figure-html/unnamed-chunk-8-1.png
docs/articles/comparison_plots_files/header-attrs-2.7/header-attrs.js
docs/articles/compile_list_ebvfiles.html
docs/articles/compile_list_ebvfiles_files/header-attrs-2.7/header-attrs.js
docs/articles/create_toplist_bull_bvch.html
docs/articles/create_toplist_bull_bvch_files/header-attrs-2.7/header-attrs.js
docs/articles/gs_job_schedule.html
docs/articles/gs_job_schedule_files/header-attrs-2.7/header-attrs.js
docs/articles/index.html
docs/articles/odg/spin-sh-html-ouput.png
docs/articles/qgert_getting_started.html
docs/articles/qgert_getting_started_files/header-attrs-2.7/header-attrs.js
docs/articles/spin_bash_script.html
docs/articles/spin_bash_script_files/header-attrs-2.7/header-attrs.js
docs/articles/split_gsruns_sorted_rt.html
docs/articles/split_gsruns_sorted_rt_files/header-attrs-2.7/header-attrs.js
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/age_in_days.html
docs/reference/create_ge_compare_plot_report_birth.html
docs/reference/create_ge_compare_plot_report_carcass.html
docs/reference/create_ge_compare_plot_report_cas.html
docs/reference/create_ge_compare_plot_report_cnvrh.html
docs/reference/create_ge_compare_plot_report_fbk.html
docs/reference/create_ge_compare_plot_report_gal.html
docs/reference/create_ge_compare_plot_report_gs_dereg.html
docs/reference/create_ge_compare_plot_report_itb.html
docs/reference/create_ge_compare_plot_report_lbe.html
docs/reference/create_ge_compare_plot_report_lbe_rh.html
docs/reference/create_ge_compare_plot_report_mar.html
docs/reference/create_ge_compare_plot_report_nd.html
docs/reference/create_ge_compare_plot_report_prod.html
docs/reference/create_ge_compare_plot_report_tem_bv.html
docs/reference/create_ge_compare_plot_report_vrdggozw.html
docs/reference/create_ge_compare_plot_report_vrdggozw_prov.html
docs/reference/create_ge_compare_plot_report_weaning.html
docs/reference/create_ge_plot_report.html
docs/reference/create_toplist_bvch_bull.html
docs/reference/get_default_plot_opts_birth.html
docs/reference/get_default_plot_opts_carcass.html
docs/reference/get_default_plot_opts_cas.html
docs/reference/get_default_plot_opts_cnvrh.html
docs/reference/get_default_plot_opts_fbk.html
docs/reference/get_default_plot_opts_gal.html
docs/reference/get_default_plot_opts_gs_dereg.html
docs/reference/get_default_plot_opts_itb.html
docs/reference/get_default_plot_opts_lbe.html
docs/reference/get_default_plot_opts_lbe_rh.html
docs/reference/get_default_plot_opts_mar.html
docs/reference/get_default_plot_opts_nd.html
docs/reference/get_default_plot_opts_prod.html
docs/reference/get_default_plot_opts_tem_bv.html
docs/reference/get_default_plot_opts_vrdggozw.html
docs/reference/get_default_plot_opts_vrdggozw_prov.html
docs/reference/get_default_plot_opts_weaning.html
docs/reference/get_default_tbl_trait_name_bvch.html
docs/reference/get_l_breed_input_bvch.html
docs/reference/get_qgert_logger.html
docs/reference/get_vec_non_traits.html
docs/reference/get_vec_resultcols_bvch.html
docs/reference/hello.html
docs/reference/index.html
docs/reference/qgert.html
docs/reference/qgert_log_debug.html
docs/reference/qgert_log_error.html
docs/reference/qgert_log_fatal.html
docs/reference/qgert_log_info.html
docs/reference/qgert_log_level.html
docs/reference/qgert_log_warn.html
docs/reference/read_top_list_info3.html
docs/reference/spin_sh.html
docs/reference/split_gsruns_sorted_rt.html
docs/reference/write_tl_xlsx.html
inst/bash/batch_diff_update.sh
inst/bash/check_gs_run_finished.sh
inst/bash/create_comp_plot_report_birth_vms.sh
inst/bash/create_comp_plot_report_carcass_vms.sh
inst/bash/create_comp_plot_report_cas.sh
inst/bash/create_comp_plot_report_cnvrh.sh
inst/bash/create_comp_plot_report_fbk.sh
inst/bash/create_comp_plot_report_gal.sh
inst/bash/create_comp_plot_report_gs_dereg.sh
inst/bash/create_comp_plot_report_itb.sh
inst/bash/create_comp_plot_report_lbe.sh
inst/bash/create_comp_plot_report_lbe_rh.sh
inst/bash/create_comp_plot_report_mar.sh
inst/bash/create_comp_plot_report_nd.sh
inst/bash/create_comp_plot_report_prod.sh
inst/bash/create_comp_plot_report_prod_hr.sh
inst/bash/create_comp_plot_report_tem_bv.sh
inst/bash/create_comp_plot_report_vrdggozw.sh
inst/bash/create_comp_plot_report_vrdggozw_prov.sh
inst/bash/create_comp_plot_report_weaning_vms.sh
inst/bash/create_tl_bvch.sh
inst/bash/split_gsRuns_sorted_rt.sh
inst/bash/update_qgert.sh
inst/extdata/curgel/diff_estimate_ggd_P_P.pdf inst/extdata/curgel/diff_estimate_lgd_P_P.pdf inst/extdata/curgel/diff_estimate_ngd_P_P.pdf inst/extdata/curgel/diff_estimate_tdd_P_P.pdf inst/extdata/curgel/ge_plot_report.Rmd
inst/extdata/current_results.txt
inst/extdata/gs/BayesC.log
inst/extdata/gs/get_sort_rt_list2.R
inst/extdata/gs/gsRuns.txt
inst/extdata/gs/rank_runtime_BayesCPi.sh
inst/extdata/prevgel/diff_estimate_ggd_P_P.pdf.gz
inst/extdata/prevgel/diff_estimate_lgd_P_P.pdf.gz
inst/extdata/prevgel/diff_estimate_ngd_P_P.pdf.gz
inst/extdata/prevgel/diff_estimate_tdd_P_P.pdf.gz
inst/extdata/previous_results.txt
inst/extdata/test_script.Rmd
inst/extdata/test_script.sh
inst/extdata/toplist_bvch/Toplisten_Stiere_BV.csv
inst/extdata/toplist_bvch/Toplisten_Stiere_OB.csv
inst/extdata/toplist_bvch/tl_trait_names.csv
inst/templates/compare_plots.Rmd.template
man/age_in_days.Rd man/create_ge_compare_plot_report_birth.Rd man/create_ge_compare_plot_report_carcass_smk.Rd man/create_ge_compare_plot_report_carcass_smn.Rd man/create_ge_compare_plot_report_carcass_smt.Rd man/create_ge_compare_plot_report_cas.Rd man/create_ge_compare_plot_report_cnvrh.Rd man/create_ge_compare_plot_report_fbk.Rd man/create_ge_compare_plot_report_gal.Rd man/create_ge_compare_plot_report_gs_dereg.Rd man/create_ge_compare_plot_report_itb.Rd man/create_ge_compare_plot_report_lbe.Rd man/create_ge_compare_plot_report_lbe_rh.Rd man/create_ge_compare_plot_report_mar.Rd man/create_ge_compare_plot_report_nd.Rd man/create_ge_compare_plot_report_prod.Rd man/create_ge_compare_plot_report_tem_bv.Rd man/create_ge_compare_plot_report_vrdggozw.Rd man/create_ge_compare_plot_report_vrdggozw_prov.Rd man/create_ge_compare_plot_report_weaning.Rd man/create_ge_plot_report.Rd man/create_toplist_bvch_bull.Rd man/get_default_plot_opts_birth.Rd man/get_default_plot_opts_carcass_smk.Rd man/get_default_plot_opts_carcass_smn.Rd man/get_default_plot_opts_carcass_smt.Rd man/get_default_plot_opts_cas.Rd man/get_default_plot_opts_cnvrh.Rd man/get_default_plot_opts_fbk.Rd man/get_default_plot_opts_gal.Rd man/get_default_plot_opts_gs_dereg.Rd man/get_default_plot_opts_itb.Rd man/get_default_plot_opts_lbe.Rd man/get_default_plot_opts_lbe_rh.Rd man/get_default_plot_opts_mar.Rd man/get_default_plot_opts_nd.Rd man/get_default_plot_opts_prod.Rd man/get_default_plot_opts_tem_bv.Rd man/get_default_plot_opts_vrdggozw.Rd man/get_default_plot_opts_vrdggozw_prov.Rd man/get_default_plot_opts_weaning.Rd man/get_default_tbl_trait_name_bvch.Rd man/get_l_breed_input_bvch.Rd man/get_qgert_logger.Rd man/get_vec_non_traits.Rd man/get_vec_resultcols_bvch.Rd man/qgert.Rd man/qgert_log_debug.Rd man/qgert_log_error.Rd man/qgert_log_fatal.Rd man/qgert_log_info.Rd man/qgert_log_level.Rd man/qgert_log_warn.Rd man/read_top_list_info3.Rd man/spin_sh.Rd man/split_gsruns_sorted_rt.Rd man/write_tl_xlsx.Rd
qgert.Rproj
scratch/20191016_diff_eval_opt.R
scratch/20191017_install_pkgs
scratch/20191017_testing_cpr.sh
scratch/20191024_prepare_cpr_tests.sh
scratch/20191024_update_pkg.sh
scratch/20210421_extend_toplist_sort.R scratch/convert_bsrc_to_rmd.R scratch/example_data_prepare.R tests/testthat.R tests/testthat/test-comparison_plot_report.R tests/testthat/test-test_spin_sh.R tests/testthat/test-toplist_bull_bvch.R
vignettes/.gitignore
vignettes/alternative_compare_plot.Rmd vignettes/comparison_plot_report.Rmd vignettes/comparison_plots.Rmd vignettes/compile_list_ebvfiles.Rmd vignettes/create_toplist_bull_bvch.Rmd vignettes/gs_job_schedule.Rmd
vignettes/odg/spin-sh-html-ouput.odg
vignettes/odg/spin-sh-html-ouput.pdf
vignettes/odg/spin-sh-html-ouput.png
vignettes/qgert_getting_started.Rmd vignettes/spin_bash_script.Rmd vignettes/split_gsruns_sorted_rt.Rmd
pvrqualitasag/qgert documentation built on June 29, 2021, 11:14 p.m.