measure_treatment_effect: Measure treatment effect in clinical data Last updated:...

In pwatrick/systematicRepurposing: Integrates Transriptomics and Clinical Data to Identify Drug Repurposing Candidates

Description

Measure treatment effect in clinical data Last updated: 2021-02-12

Usage

measure_treatment_effect(
  .data,
  biomarker_tbl,
  drug_name,
  phenotype,
  biomarker_name,
  cohort_vector
)

Arguments

.data	A tibble with columns, c("person_id", "drug_exposed", "treatment_new_exposed")
biomarker_tbl	A tibble with columns, c("person_id", "biomarker_baseline_value", "biomarker_treatment_value", "biomarker_change", "biomarker_name")
drug_name	A string, e.g., "Lisinopril"
phenotype	A string, e.g., "Hyperlipidemia"
biomarker_name	A string, e.g., "LDL cholesterol"
cohort_vector	A vector, e.g,. c("Primary Analysis", "Subanalysis 1", "Subanalysis 2", "Subanalysis 3")

pwatrick/systematicRepurposing documentation built on March 24, 2021, 5:49 p.m.