A Spatial Individual-based model for land-based organisms

allele.fixation | Allele fixation |

baseline.breeding | Create population available for breeding |

baseline.survival | Baseline survival for individuals |

breed | Breed valid individuals |

breeding.pairs | Construct breeding pairs of males/females |

breeding.table | Define breeding parameters |

build.population.graph | Build a graph for a list of populations |

circle.habitat | Define a circular habitat |

circle.only | Define a circular habitat with constant value |

circle.pts.density | Define a set of circular point habitats |

convex.home.range | Estimate home range for a movement parameter |

create.ibm.population | Create an initial population |

crowding.survival | Determine survival due to crowding |

crowding.table | Define crowding table |

do.breeding | Breed a pair of individuals |

fixation | Time to fixation for an spatial individual-based model |

F.stat | Calculate Wright F statistic for a population |

layout.as.tree | Create a tree-style layout for igraph |

make_rpois_num | Generate a Poisson stationary set of N points within the... |

model.summary | Create summary table for a model run |

move | Move the individuals in the population using the defined... |

movement.table | Define movement parameters for individuals |

multiple.step | Perform multiple steps (generations) for the population |

multiple.step.habitat | Perform multiple steps (generations) for the population,... |

origin.density | Create a table of densities about the origin |

panmictic.fixation | Time to fixation for a neutral allele |

plot.all.gens | Plot all generations of a model as points |

plot.crowding.table | Plot the crowding table |

plot.density.example | Density plot for a given number of points and bandwidth |

plot.pop.count | Plot total population |

plot.population.graph | Plot the population as a family tree |

plot.survival | Create plot showing probability of survival over time |

points.habitat | Define a set of locations with a circular habitat |

pop.summary | Population summary statistics |

single.step | Perform a single (generation) step for the population |

survival.table | Define survival parameters for individuals |

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