plot_therMizer: Summary plot for 'therMizerSim' objects

In pwoodworth-jefcoats/Size-Based-Modeling: Mizer With The Effects Of Temperature Included

Summary plot for therMizerSim objects

Description

After running a projection, produces 6 plots in the same window: feeding level, predation mortality, fishing mortality, and temperature effects on metabolism and encounter rate for each species by size; and biomass of each species through time. This method just uses the other plotting methods and puts them all in one window.

Usage

## S4 method for signature 'therMizerSim,missing'
plot(x, y, ...)

Arguments

x	An object of class therMizerSim
y	Not used
...	For additional arguments see the documentation for plotBiomass, plotFeedingLevel,plotM2, plotTempEffectEncount, plotTempEffectMetab, and plotFMort.

Value

A viewport object

Examples

## Not run: 
data(NS_species_params_gears)
data(inter)
params <- therMizerParams(NS_species_params_gears, inter)
sim <- project_therMizer(params, effort=1, t_max=20, t_save = 2)
plot(sim)
plot(sim, time_range = 10:20) # change time period for size-based plots
plot(sim, min_w = 10, max_w = 1000) # change size range for biomass plot

## End(Not run)

pwoodworth-jefcoats/Size-Based-Modeling documentation built on Sept. 15, 2023, 8:13 a.m.