fit_all_models: Model fitting results for each SNP considering as XCI, XCI-E...

In qiuanzhu/xlink: Genetic Association Models for X-Chromosome SNPS on Continuous, Binary and Survival Outcomes

Description

fit_all_models returns model fitting results for each SNP understanding as XCI, XCI-E and XCI-S type respectively. Model comparison results is provided by using AIC as a criterion.

Usage

fit_all_models(resp, os, ostime, snp, gender, male, female, covars, model,
  data)

Arguments

resp	Response variable for continuous or binary model fitting.
os	Survival indicator, 1 for death, 0 for censoring.
ostime	Duration time of survival.
snp	Single SNP name.
gender	Gender variable.
male	Male indicator in gender variable.
female	Female indicator in gender variable.
covars	Covariates list.
model	Fitting model type. For 'linear', fitting linear model. For 'binary', fitting logistic regression model. For 'survival', fitting survival model.
data	Data set.

Value

It returns estimated parameters, confidence interval and P value for each variable. Baseline model and full model maximum likelihood estimation are provided.

See Also

lm{stats} for linear model, glm{stats} for logistic regression model, and coxph{survival} for survival model.

qiuanzhu/xlink documentation built on Aug. 14, 2019, 11:23 a.m.