API for quevedor2/WadingPool
A toolkit for shallow/low-pass whole genome sequencing analysis
| Global functions | |
|---|---|
| .autosomeMatch | Source code |
| .check | Source code |
| .chk_est_cols | Source code |
| .chk_seg | Source code |
| .chrmMatch | Source code |
| .cleanGenotype | Source code |
| .confstats | Source code |
| .f1 | Source code |
| .genStateMap | Source code |
| .getChrIdx | Source code |
| .getGT | Source code |
| .pr | Source code |
| .re | Source code |
| aggregateAndFilter | Man page Source code |
| allbyall | Man page Source code |
| calcExpectedHets | Man page Source code |
| combZygPos | Man page Source code |
| fitHMM | Man page Source code |
| genSnpZygosity | Man page Source code |
| getExpectedN | Man page Source code |
| getSampleSimilarity | Man page Source code |
| metrics | Man page Source code |
| parseOutput | Man page Source code |
| parseSeg | Man page Source code |
| plotCnZyg | Man page Source code |
| plotHMM | Man page Source code |
| plotSampleSimilarity | Man page Source code |
| sanitizeData | Man page Source code |
| saturationCurve | Man page Source code |
| simulate | Man page Source code |
| toBed | Man page Source code |
