plotSampleSimilarity: Sim-N plotter
In quevedor2/WadingPool: A toolkit for shallow/low-pass whole genome sequencing analysis
View source: R/getSampleSimilarity.R
Description
Plot the similarity and n-matrix
Usage
1
plotSampleSimilarity(sim_mat, n_mat, midpoint = 0.5, mid_diag = FALSE)
Arguments
sim_mat
Similarity matrix
n_mat
Matrix of N's, same size and format as sim_mat
midpoint
Midpoint value of colour range (Default=0.5)
mid_diag
boolean: Set diagonal of similarity matrix to midpoint (Default=FALSE)
quevedor2/WadingPool documentation built on Dec. 22, 2021, 10:59 a.m.
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View source: R/getSampleSimilarity.R
Description
Plot the similarity and n-matrix
Usage
1 | plotSampleSimilarity(sim_mat, n_mat, midpoint = 0.5, mid_diag = FALSE)
|
Arguments
sim_mat |
Similarity matrix |
n_mat |
Matrix of N's, same size and format as sim_mat |
midpoint |
Midpoint value of colour range (Default=0.5) |
mid_diag |
boolean: Set diagonal of similarity matrix to midpoint (Default=FALSE) |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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