createTable1: Create a table 1
In quinterpriest/FeatureExtraction: Generating Features for a Cohort

createTable1

R Documentation

Create a table 1

Description

Creates a formatted table of cohort characteristics, to be included in publications or reports. Allows for creating a table describing a single cohort, or a table comparing two cohorts.

Usage

createTable1(
  covariateData1,
  covariateData2 = NULL,
  cohortId1 = NULL,
  cohortId2 = NULL,
  specifications = getDefaultTable1Specifications(),
  output = "two columns",
  showCounts = FALSE,
  showPercent = TRUE,
  percentDigits = 1,
  valueDigits = 1,
  stdDiffDigits = 2
)

Arguments

`covariateData1`	The covariate data of the cohort to be included in the table.
`covariateData2`	The covariate data of the cohort to also be included, when comparing two cohorts.
`cohortId1`	If provided, `covariateData1` will be restricted to this cohort. If not provided, `covariateData1` is assumed to contain data on only 1 cohort.
`cohortId2`	If provided, `covariateData2` will be restricted to this cohort. If not provided, `covariateData2` is assumed to contain data on only 1 cohort.
`specifications`	Specifications of which covariates to display, and how.
`output`	The output format for the table. Options are `output = "two columns"`, `output = "one column"`, or `output = "list"`.
`showCounts`	Show the number of cohort entries having the binary covariate?
`showPercent`	Show the percentage of cohort entries having the binary covariate?
`percentDigits`	Number of digits to be used for percentages.
`valueDigits`	Number of digits to be used for the values of continuous variables.
`stdDiffDigits`	Number of digits to be used for the standardized differences.