Files in quon-titative-biology/scAlign
An alignment and integration method for single cell genomics
.DS_Store
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
NEWS
R/.Rapp.history
R/MultiCCA.R
R/architectures.R
R/backend_decoder.R
R/backend_encoder.R
R/data.R
R/scAlign.R
R/scAlignClass.R
R/scAlignMulti.R
R/scAlignSeuratWrapper.R
R/train_decoder.R
R/train_encoder.R
R/train_encoder_multi.R
R/utils.R
README.md
data/.DS_Store
data/cellbench.rda
man/DecoderVariance.Rd
man/ExtractGenes.Rd
man/GetCharMetadata.Rd
man/GetCrit.Rd
man/MeanDecoderVariance.Rd
man/PlotTSNE.Rd
man/RunMultiCCA.Rd
man/SelectColors.Rd
man/UpdateW.Rd
man/alignment_score.Rd
man/as.SingleCellExperimentList.Rd
man/cellbench.Rd
man/compute_kernel_matrix.Rd
man/decoderModel_add_mse_loss.Rd
man/decoderModel_calc_projection.Rd
man/decoderModel_create_train_op.Rd
man/decoderModel_emb_to_proj.Rd
man/decoderModel_train_decoder.Rd
man/decoder_large.Rd
man/decoder_medium.Rd
man/decoder_small.Rd
man/define_kernel_matrix.Rd
man/dot-check_all_args.Rd
man/dot-check_tensorflow.Rd
man/dot-data_setup.Rd
man/dot-early_stop.Rd
man/dot-is.wholenumber.Rd
man/dot-learning_rate.Rd
man/dot-plotTSNE.Rd
man/encoderModel_add_logit_loss.Rd
man/encoderModel_add_semisup_loss_data_driven.Rd
man/encoderModel_calc_embedding.Rd
man/encoderModel_calc_logit.Rd
man/encoderModel_create_train_op.Rd
man/encoderModel_data_to_embedding.Rd
man/encoderModel_embedding_to_logit.Rd
man/encoderModel_gaussian_kernel.Rd
man/encoderModel_train_encoder.Rd
man/encoderModel_train_encoder_multi.Rd
man/encoder_large.Rd
man/encoder_medium.Rd
man/encoder_small.Rd
man/gaussianKernel.Rd
man/l2n.Rd
man/scAlign.Rd
man/scAlignArguments.Rd
man/scAlignCreateObject.Rd
man/scAlignMulti.Rd
man/scAlignOptions.Rd
tests/testthat.R
tests/testthat/test-scalign.R
